PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00091.1.g00500.1.sm.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 430aa    MW: 45886.8 Da    PI: 8.7754
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00091.1.g00500.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.33.8e-18199248255
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                    y+GVr+++ +g+WvAeIr p++   r+r +lg+f++ae+Aa a+++ + kl+g
  Zpz_sc00091.1.g00500.1.sm.mk 199 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDSAEDAAMAYDREAFKLRG 248
                                   59******9.**********955...5*************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.89E-30198257No hitNo description
Gene3DG3DSA:3.30.730.102.5E-31199257IPR001471AP2/ERF domain
PROSITE profilePS5103222.695199256IPR001471AP2/ERF domain
SMARTSM003802.3E-37199262IPR001471AP2/ERF domain
SuperFamilySSF541711.44E-22199258IPR016177DNA-binding domain
PRINTSPR003672.8E-10200211IPR001471AP2/ERF domain
PfamPF008471.4E-11200248IPR001471AP2/ERF domain
PRINTSPR003672.8E-10222238IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    Send to blast
MESSSGSGES SACGGAGDRG RRWKGKGVTL SPIQPRRQLA PVMEDVSVAS SLRPLRKIGQ  60
AADRLQRTAS SLSTYSSSAP PSPRSIAVSS SAPSEGHIFP FAYEPSTQTA GGSPRLLPTW  120
QQSSLSQPAS PQQRPLQRQQ MISFGEPPQY HAQFLGPESP VQLRYWSEAL NLSPRGGQAG  180
GGVLPSLYQH LLRAPPQKLY RGVRQRHWGK WVAEIRLPRN RTRLWLGTFD SAEDAAMAYD  240
REAFKLRGDN ARLNFPDRFL GKGRAGGSGR TSASSAAALG ASCSSSSPSP PPTPDEANLQ  300
QTAVLRRAEG SAEKQTQTPV ATSSVEEGSS GDTAMPYLAE MFHAPVVSGI DWSPVDEAWF  360
STWGPGSSLW DYDMDGARGI FLNGHFAGDE SGMEHSNAQE ASAATGTDIA CNHVPVTPAS  420
SSPTHFRAAP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A9e-20198258465ATERF1
3gcc_A9e-20198258465ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7275131e-116KJ727513.1 Zea mays clone pUT5372 AP2-EREBP transcription factor (EREB154) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012703079.11e-162PREDICTED: ethylene-responsive transcription factor ERF054-like
TrEMBLK3YD661e-159K3YD66_SETIT; Uncharacterized protein
STRINGSi012169m1e-158(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP36913268
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.16e-36ERF family protein